../../tmp/servers/virsirnadb/14003131
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi2091 | 1 | gcatcatcatcataatcaa | 19 | |
| AY297748.1 | Human metapneumovirus isolate CAN98-75, complete genome | 4589 | ................... | 4607 | 100 |
| AY297748.1 | Human metapneumovirus isolate CAN98-75, complete genome | 4593 | _.........a..c.aa.. | 4610 | 73 |
| AY297748.1 | Human metapneumovirus isolate CAN98-75, complete genome | 4588 | __.g.........c..a._ | 4603 | 68 |
| AY297748.1 | Human metapneumovirus isolate CAN98-75, complete genome | 1234 | _________........._ | 1226 | 47 |
| AY525843.1 | Human metapneumovirus isolate NL/1/99, complete genome | 4590 | ................... | 4608 | 100 |
| AY525843.1 | Human metapneumovirus isolate NL/1/99, complete genome | 4594 | _.........a..c.ag.. | 4611 | 73 |
| AY525843.1 | Human metapneumovirus isolate NL/1/99, complete genome | 4589 | __.g.........c..a._ | 4604 | 68 |
| AY525843.1 | Human metapneumovirus isolate NL/1/99, complete genome | 5007 | _______..a......... | 5018 | 57 |
| AY525843.1 | Human metapneumovirus isolate NL/1/99, complete genome | 1234 | _________........._ | 1226 | 47 |
| DQ843658.1 | Human metapneumovirus strain BJ1816, complete genome | 4581 | ................... | 4599 | 100 |
| DQ843658.1 | Human metapneumovirus strain BJ1816, complete genome | 4585 | _.........a..c.ag.. | 4602 | 73 |
| DQ843658.1 | Human metapneumovirus strain BJ1816, complete genome | 4580 | __.g.........c..a._ | 4595 | 68 |
| DQ843658.1 | Human metapneumovirus strain BJ1816, complete genome | 1225 | _________........._ | 1217 | 47 |
| DQ843658.1 | Human metapneumovirus strain BJ1816, complete genome | 6361 | __________......... | 6353 | 47 |
| DQ843659.1 | Human metapneumovirus strain BJ1887, complete genome | 2790 | ___....gg........._ | 2776 | 68 |
| DQ843659.1 | Human metapneumovirus strain BJ1887, complete genome | 5011 | _______..a......... | 5022 | 57 |
| DQ843659.1 | Human metapneumovirus strain BJ1887, complete genome | 1227 | _________........._ | 1219 | 47 |
| DQ843659.1 | Human metapneumovirus strain BJ1887, complete genome | 7673 | _____........._____ | 7681 | 47 |
| DQ843659.1 | Human metapneumovirus strain BJ1887, complete genome | 13207 | __________......... | 13199 | 47 |
| AB503857.1 | Human metapneumovirus genomic RNA, complete genome, isolate: Jpn03-1 | 2798 | ___....ag........._ | 2784 | 68 |
| AB503857.1 | Human metapneumovirus genomic RNA, complete genome, isolate: Jpn03-1 | 5021 | _______..a......... | 5032 | 57 |
| AB503857.1 | Human metapneumovirus genomic RNA, complete genome, isolate: Jpn03-1 | 1235 | _________........._ | 1227 | 47 |
| AB503857.1 | Human metapneumovirus genomic RNA, complete genome, isolate: Jpn03-1 | 7683 | _____........._____ | 7691 | 47 |
| AB503857.1 | Human metapneumovirus genomic RNA, complete genome, isolate: Jpn03-1 | 13217 | __________......... | 13209 | 47 |
| NC_004148.2 | Human metapneumovirus, complete genome | 2798 | ___....gg........._ | 2784 | 68 |
| NC_004148.2 | Human metapneumovirus, complete genome | 5020 | _______..a......... | 5031 | 57 |
| NC_004148.2 | Human metapneumovirus, complete genome | 1235 | _________........._ | 1227 | 47 |
| NC_004148.2 | Human metapneumovirus, complete genome | 7681 | _____........._____ | 7689 | 47 |
| NC_004148.2 | Human metapneumovirus, complete genome | 13215 | __________......... | 13207 | 47 |
| AF371337.2 | Human metapneumovirus isolate 00-1, complete genome | 6170 | __..........c..____ | 6182 | 63 |
| AF371337.2 | Human metapneumovirus isolate 00-1, complete genome | 5710 | ___.........a._____ | 5720 | 52 |
| AF371337.2 | Human metapneumovirus isolate 00-1, complete genome | 1220 | _________........._ | 1212 | 47 |
| AF371337.2 | Human metapneumovirus isolate 00-1, complete genome | 7715 | _____........._____ | 7723 | 47 |
| AF371337.2 | Human metapneumovirus isolate 00-1, complete genome | 13249 | __________......... | 13241 | 47 |
| CQ840316.1 | Sequence 1 from Patent WO2004057021 | 6170 | __..........c..____ | 6182 | 63 |
| CQ840316.1 | Sequence 1 from Patent WO2004057021 | 5710 | ___.........a._____ | 5720 | 52 |
| CQ840316.1 | Sequence 1 from Patent WO2004057021 | 1220 | _________........._ | 1212 | 47 |
| CQ840316.1 | Sequence 1 from Patent WO2004057021 | 7715 | _____........._____ | 7723 | 47 |
| CQ840316.1 | Sequence 1 from Patent WO2004057021 | 13249 | __________......... | 13241 | 47 |